STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aglAmylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b. (1536 aa)    
Predicted Functional Partners:
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
  
 
 0.987
pgm1
Phosphoglucomutase 1; Belongs to the phosphohexose mutase family.
   
 
 0.969
LOC101175508
Uncharacterized protein; Belongs to the phosphohexose mutase family.
   
 
 0.969
LOC101163630
Alpha-amylase.
   
 0.945
LOC101169415
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.942
LOC101168232
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.942
LOC101171113
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.937
si
Uncharacterized protein.
    
 0.932
pgm2
Phosphoglucomutase 2.
   
 
 0.918
pgm2l1
Phosphoglucomutase 2-like 1.
   
 
 0.918
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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