STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162366Zgc:194189. (263 aa)    
Predicted Functional Partners:
dmy
Doublesex- and mab-3-related transcription factor 1; Transcription factor that acts both as a transcription.
      
 0.690
sox9
HMG box domain-containing protein.
   
 0.658
figla
BHLH domain-containing protein.
    
 
 0.520
wt1-2
Uncharacterized protein.
    
 0.499
fshr
Thyrotropin receptor; Receptor for the thyroid-stimulating hormone (TSH) or thyrotropin. Also acts as a receptor for the heterodimeric glycoprotein hormone (GPHA2:GPHB5) or thyrostimulin. The activity of this receptor is mediated by G proteins which activate adenylate cyclase. Plays a central role in controlling thyroid cell metabolism. Belongs to the G-protein coupled receptor 1 family. FSH/LSH/TSH subfamily.
      
 0.447
LOC101158433
Hydroxysteroid (17-beta) dehydrogenase 7.
      
 0.438
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
      
 0.437
LOC101156733
Wee1-like protein kinase.
   
 
 0.428
LOC101166143
Growth differentiation factor 9.
     
 0.426
rfx2
Regulatory factor X, 2 (influences HLA class II expression).
    
 
 0.422
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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