Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101161005WH1 domain-containing protein. (384 aa)    
Predicted Functional Partners:
grm1
Glutamate receptor, metabotropic 1a.
    
 0.982
HOMER1
Homer scaffold protein 1.
    
 0.947
LOC101163175
Homer scaffold protein 1b.
    
 0.947
LOC101159673
DSN1 component of MIS12 kinetochore complex.
    
  0.916
LOC101171794
Uncharacterized protein.
      
 0.914
LOC101173805
Glutamate receptor, metabotropic 5a.
    
 0.833
grm5
Glutamate receptor, metabotropic 5b.
    
 0.833
mos
V-mos Moloney murine sarcoma viral oncogene homolog; Belongs to the protein kinase superfamily.
    
 0.816
thoc2
THO complex 2.
      
 0.739
ENSORLP00000035838
FERM_f0 domain-containing protein.
    
 0.737
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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