Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cmtm4CKLF-like MARVEL transmembrane domain containing 4. (208 aa)    
Predicted Functional Partners:
LOC101172145
CKLF-like MARVEL transmembrane domain containing 3.
      
 0.887
cmtm6
MARVEL domain-containing protein.
    
 
 0.779
cmtm7
CKLF-like MARVEL transmembrane domain containing 7.
      
 0.725
qrsl1
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
      
 0.714
cmtm8
CKLF-like MARVEL transmembrane domain containing 8a.
      
 0.705
mal2
Mal, T cell differentiation protein 2 (gene/pseudogene).
      
 0.693
pllp
Plasmolipin.
      
 0.691
Bean1
Uncharacterized protein.
      
 0.651
bend7
Si:ch211-220f12.4.
      
 0.599
polr2m
RNA polymerase II subunit M.
      
 0.576
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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