STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101164924IFI30 lysosomal thiol reductase. (275 aa)    
Predicted Functional Partners:
wars1
Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.689
ccdc15
Coiled-coil domain containing 15.
      
 0.685
pdia3
Protein disulfide-isomerase.
      
 0.678
Wdr90
WD_REPEATS_REGION domain-containing protein.
    
   0.613
ENSORLP00000042816
Uncharacterized protein.
    
   0.613
auts2
Activator of transcription and developmental regulator AUTS2 a.
      
 0.606
LOC101175061
Scm polycomb group protein like 2.
      
 0.562
SCML2
Scm polycomb group protein like 2.
      
 0.562
ENSORLP00000041141
Uncharacterized protein.
   
   0.550
spag8
Sperm associated antigen 8.
    
   0.547
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.