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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LLK6_ORYLAUncharacterized protein. (512 aa)    
Predicted Functional Partners:
ENSORLP00000041683
Uncharacterized protein.
 
      0.899
ENSORLP00000027598
Uncharacterized protein.
 
    
0.893
ENSORLP00000044816
Ig-like domain-containing protein.
 
      0.739
ENSORLP00000037047
Uncharacterized protein.
 
      0.718
ENSORLP00000027500
Uncharacterized protein.
 
      0.692
ENSORLP00000030974
Uncharacterized protein.
 
      0.653
ENSORLP00000027531
Uncharacterized protein.
 
      0.647
ENSORLP00000031355
Uncharacterized protein.
 
      0.642
ENSORLP00000041646
Uncharacterized protein.
 
      0.619
ENSORLP00000042987
Uncharacterized protein.
 
      0.619
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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