Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2LLK6_ORYLAUncharacterized protein. (512 aa)    
Predicted Functional Partners:
ENSORLP00000041683
Uncharacterized protein.
 
      0.899
ENSORLP00000027598
Uncharacterized protein.
 
    
0.893
ENSORLP00000044816
Ig-like domain-containing protein.
 
      0.739
ENSORLP00000037047
Uncharacterized protein.
 
      0.718
ENSORLP00000027500
Uncharacterized protein.
 
      0.692
ENSORLP00000030974
Uncharacterized protein.
 
      0.653
ENSORLP00000027531
Uncharacterized protein.
 
      0.647
ENSORLP00000031355
Uncharacterized protein.
 
      0.642
ENSORLP00000041646
Uncharacterized protein.
 
      0.619
ENSORLP00000042987
Uncharacterized protein.
 
      0.619
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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