STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpha2Glycoprotein hormone subunit alpha 2. (136 aa)    
Predicted Functional Partners:
gphb5
Glycoprotein hormone subunit beta 5.
    
 0.892
LOC101171780
Si:dkey-23i12.9.
    
 0.839
Unc79
Uncharacterized protein.
    
 0.786
gpr1
G protein-coupled receptor 1; Belongs to the G-protein coupled receptor 1 family.
     
 0.670
LOC101171658
Thyroid stimulating hormone subunit beta a.
    
 0.592
ENSORLP00000044512
Cys_knot domain-containing protein.
    
 0.592
KLHL28
Kelch like family member 28.
     
 0.562
c9h12orf43
Zgc:162025.
      
 0.559
mmab
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
    
 
 0.557
LOC101160447
RAN binding protein 2.
    
 0.537
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.