Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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[Homology]
Score
agtAngiotensinogen; Belongs to the serpin family. (460 aa)    
Predicted Functional Partners:
LOC101174201
Angiotensin II receptor, type 2; Belongs to the G-protein coupled receptor 1 family.
    
 0.999
Agtr1
Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.
    
 0.999
cltrn
Si:dkey-194e6.1.
    
 0.999
atp6ap2
ATPase H+ transporting accessory protein 2.
    
 0.990
enpep
Aminopeptidase.
  
 0.982
LOC111946416
Angiotensin-converting enzyme.
    
 0.981
ace
Angiotensin-converting enzyme.
    
 0.981
ENSORLP00000043209
Alpha-1-microglobulin/bikunin precursor.
   
 
 0.852
mmel1
Membrane metallo-endopeptidase-like 1.
    
 0.844
MME
Membrane metalloendopeptidase.
    
 0.844
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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