STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NXPH3Neurexophilin 3. (257 aa)    
Predicted Functional Partners:
LOC105354440
Uncharacterized protein.
  
    0.524
LOC101172155
Si:dkey-238f9.1.
  
    0.517
ENSORLP00000031641
Zgc:153675.
  
     0.503
H2MEF6_ORYLA
Melanocortin 4 receptor.
  
     0.470
H2LQ83_ORYLA
TAFA chemokine like family member 4b.
  
    0.461
s100a1
Protein S100; Belongs to the S-100 family.
  
     0.448
LOC101155878
Protein S100; Belongs to the S-100 family.
  
     0.447
lpar1
Lysophosphatidic acid receptor 1; Belongs to the G-protein coupled receptor 1 family.
  
     0.439
LOC101162995
Bone morphogenetic protein/retinoic acid inducible neural-specific 3a, tandem duplicate 1.
  
    0.438
LOC101154949
Uncharacterized protein.
  
    0.436
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.