STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LLS9_ORYLASi:dkey-23i12.7. (111 aa)    
Predicted Functional Partners:
LOC101160956
JunE proto-oncogene, AP-1 transcription factor subunit.
   
 0.765
ENSORLP00000032968
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
   
 0.765
LOC101169770
JunB proto-oncogene, AP-1 transcription factor subunit a.
   
 0.696
LOC101164062
JunB proto-oncogene, AP-1 transcription factor subunit b.
   
 0.696
JUND
BZIP domain-containing protein.
   
 0.660
LOC111949028
BZIP domain-containing protein.
   
 0.660
nuf2
UF2 component of NDC80 kinetochore complex.
   
 0.647
spc25
SPC25 component of NDC80 kinetochore complex.
   
 0.646
fosb
FBJ murine osteosarcoma viral oncogene homolog B.
     
0.573
ndc80
NDC80 kinetochore complex component.
   
 0.572
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.