STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LLT1_ORYLASphingosine-1-phosphate receptor 2; Belongs to the G-protein coupled receptor 1 family. (362 aa)    
Predicted Functional Partners:
gna12
G protein subunit alpha 12.
    
 0.650
LOC101159749
Guanine nucleotide binding protein (G protein), alpha 13b.
    
 0.650
LOC101162018
Uncharacterized protein.
    
 0.650
LOC101175626
Uncharacterized protein.
    
 0.650
nuak2
NUAK family, SNF1-like kinase, 2.
      
 0.569
ARHGEF17
Rho guanine nucleotide exchange factor (GEF) 17.
      
 0.518
rai14
Retinoic acid induced 14.
     
 0.505
eif3g
Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.
      
 0.501
LOC101168199
WD_REPEATS_REGION domain-containing protein.
    
  0.475
LOC101175500
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
  0.475
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.