STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r16bProtein phosphatase 1, regulatory subunit 16B. (549 aa)    
Predicted Functional Partners:
LOC101158483
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.699
LOC101155811
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.699
LOC101169945
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.672
LOC101171445
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.672
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.672
dhx35
DEAH-box helicase 35.
   
 0.494
ENSORLP00000028016
ANK_REP_REGION domain-containing protein.
  
 
   0.466
rfxank
Regulatory factor X-associated ankyrin-containing protein.
  
     0.464
LOC101154969
Protein phosphatase 1, regulatory (inhibitor) subunit 14Aa.
     
 0.459
ENSORLP00000035782
ANK_REP_REGION domain-containing protein.
  
 
   0.459
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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