STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM47Transmembrane protein 47. (181 aa)    
Predicted Functional Partners:
kbtbd2
Kelch repeat and BTB (POZ) domain containing 2.
      
 0.703
ipo13
Importin 13.
      
 0.634
ipo4
Importin 4.
      
 0.630
LOC101173088
Cytochrome b5 reductase 4.
      
 0.612
gatad2b
GATA zinc finger domain containing 2B.
      
 0.602
pik3r4
Phosphoinositide-3-kinase, regulatory subunit 4.
      
 0.602
C2CD4C
C2 calcium dependent domain containing 4C.
   
  
 0.597
alpk3
Uncharacterized protein.
      
 0.589
abcc8
ATP-binding cassette, sub-family C (CFTR/MRP), member 8.
   
  
 0.575
dapk3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
  
 0.568
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.