STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167567G protein-coupled receptor 26. (352 aa)    
Predicted Functional Partners:
grik4
Glutamate receptor, ionotropic, kainate 4.
   
  
 0.472
brinp1
Bone morphogenetic protein/retinoic acid inducible neural-specific 1.
   
  
 0.463
ENSORLP00000045559
Pleckstrin homology-like domain, family A, member 3.
  
     0.417
bloc1s5
Biogenesis of lysosomal organelles complex-1, subunit 5, muted.
      
 0.411
wdr35
WD repeat-containing protein 35.
     
 0.401
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.