STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LLX8_ORYLAPurinergic receptor P2Y11; Belongs to the G-protein coupled receptor 1 family. (307 aa)    
Predicted Functional Partners:
rsl1d1
Ribosomal L1 domain containing 1.
   
   0.965
rrp15
Ribosomal RNA processing 15 homolog.
   
 
 0.959
rpf1
Ribosome production factor 1 homolog.
   
 
 0.944
ddx27
DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family.
   
   0.940
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.928
rpf2
Ribosome production factor 2 homolog.
   
 
 0.926
ddx56
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
   
   0.921
cebpz
CCAAT enhancer binding protein zeta.
   
 
 0.920
noc2l
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.918
rbm28
RNA binding motif protein 28.
   
   0.908
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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