STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aurkaAurora kinase A; Belongs to the protein kinase superfamily. (439 aa)    
Predicted Functional Partners:
incenp
Uncharacterized protein.
   
 0.991
cdca8
Cell division cycle associated 8.
   
 0.978
tpx2
TPX2 microtubule nucleation factor.
   
 0.949
LOC101155061
Baculoviral IAP repeat containing 5a.
   
 0.937
birc6
Baculoviral IAP repeat containing 6.
   
 0.924
Birc6
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.924
LOC101168459
Baculoviral IAP repeat containing 5b.
   
 0.923
ube2c
Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.904
ndc80
NDC80 kinetochore complex component.
   
 
 0.903
kif11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.882
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.