Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H2LM32_ORYLAAngiopoietin-like 6. (487 aa)    
Predicted Functional Partners:
tie1
Tyrosine kinase with immunoglobulin-like and EGF-like domains 1.
   
 0.652
dmap1
DNA methyltransferase 1 associated protein 1.
      
 0.494
eif3g
Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.
      
 0.489
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.473
mcrs1
Microspherule protein 1.
    
 0.449
masp2
Mannan-binding lectin serine peptidase 2.
    
 0.448
sema4c
Uncharacterized protein; Belongs to the semaphorin family.
      
 0.448
raver1
Ribonucleoprotein, PTB-binding 1.
      
 0.444
CDC37
Cell division cycle 37 homolog (S. cerevisiae).
      
 0.444
LOC101168433
Uncharacterized protein.
      
 0.444
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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