Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ca6Carbonic anhydrase VI; Belongs to the alpha-carbonic anhydrase family. (536 aa)    
Predicted Functional Partners:
noc2l
NOC2-like nucleolar associated transcriptional repressor.
   
  
 0.790
tmem201
Transmembrane protein 201.
      
 0.739
ca10
Carbonic anhydrase Xa; Belongs to the alpha-carbonic anhydrase family.
  
   
0.734
hes4
Uncharacterized protein.
      
 0.683
c24h6orf58
Liver-enriched gene 1, tandem duplicate 2.
   
  
 0.646
slc25a36
Solute carrier family 25 member 36b; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.629
LOC101156608
Solute carrier family 25 member 36; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.629
gpr157
G protein-coupled receptor 157.
      
 0.618
LOC101155685
SplA/ryanodine receptor domain and SOCS box containing 1.
      
 0.603
LOC101154948
Solute carrier family 2 member 5; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
  
 0.602
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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