Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101164902ATPase copper transporting alpha. (1490 aa)    
Predicted Functional Partners:
atox1
Antioxidant 1 copper chaperone.
    
 0.951
ccs
Copper chaperone for superoxide dismutase.
  
 0.932
commd1
Copper metabolism (Murr1) domain containing 1.
    
 
 0.810
pdzd11
PDZ domain containing 11.
    
 0.745
slc31a1
Solute carrier family 31 member 1.
    
 
 0.707
SLC45A4
Solute carrier family 45 member 4.
      
 0.621
bdnf
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
      
 0.604
brca1
Uncharacterized protein.
      
 0.600
oca2
CitMHS domain-containing protein.
     
 0.589
LOC101171566
Ceruloplasmin; Belongs to the multicopper oxidase family.
  
 
 0.584
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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