STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155685SplA/ryanodine receptor domain and SOCS box containing 1. (273 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog b; Belongs to the SKP1 family.
    
 0.850
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.696
ENSORLP00000041981
Uncharacterized protein.
    
 0.677
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.624
LOC101154889
Cullin 5; Belongs to the cullin family.
    
 0.624
H2M7E3_ORYLA
Uncharacterized protein.
    
 
 0.617
Mycbp2
RING-type domain-containing protein.
    
 
 0.617
pawr
PRKC, apoptosis, WT1, regulator.
    
 
 0.584
cul1
Cullin 1b; Belongs to the cullin family.
   
 0.563
ELOB
Ubiquitin-like domain-containing protein.
    
 0.554
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.