STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp10bPhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1277 aa)    
Predicted Functional Partners:
kif21b
Kinesin family member 21B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.782
acsl3
Uncharacterized protein.
    
 
 0.632
gas2
Growth arrest-specific 2a.
   
  
 0.620
tmem30a
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.530
LOC101166445
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.530
LOC111948766
Uncharacterized protein.
      
 0.507
LOC101172542
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.502
LOC101160812
Opiate receptor-like 1; Belongs to the G-protein coupled receptor 1 family.
     
 0.500
UBE3A
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
    
 
 0.484
igfbp2
Insulin-like growth factor binding protein 2a.
      
 0.468
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: medium (64%) [HD]