Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc25a33Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family. (318 aa)    
Predicted Functional Partners:
cct3
T-complex protein 1 subunit gamma.
    
 
 0.791
edf1
Endothelial differentiation-related factor 1.
    
   0.604
pum1
Pumilio RNA-binding family member 1.
    
   0.599
pum2
Pumilio 2.
    
   0.599
pex19
Peroxisomal biogenesis factor 19.
    
 0.570
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
      
 0.512
map2k2
Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.
      
 0.502
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
   0.469
bola1
BolA family member 1; Belongs to the BolA/IbaG family.
      
 0.463
slc25a53
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.432
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.