Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S1PR3Sphingosine-1-phosphate receptor 3; Belongs to the G-protein coupled receptor 1 family. (373 aa)    
Predicted Functional Partners:
palm
Paralemmin 1b.
    
 
 0.828
LOC101171449
ATP-binding cassette, sub-family A (ABC1), member 4a.
      
 0.816
LOC101169809
Si:dkey-26c10.5.
    
 0.553
LOC105355978
C-type lectin domain-containing protein.
    
 0.553
LOC100125525
Uncharacterized protein.
      
 0.472
pdgfrb
Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 
 0.443
LOC101168199
WD_REPEATS_REGION domain-containing protein.
    
  0.403
LOC101175500
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
  0.403
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
  0.403
ol-gb1
WD_REPEATS_REGION domain-containing protein.
    
  0.403
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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