STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101168609Sulfotransferase; Belongs to the sulfotransferase 1 family. (301 aa)    
Predicted Functional Partners:
LOC100125514
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
 
0.555
sult1a4
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
 
0.549
sult4a1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
 
 
0.540
slc9a3r2
Uncharacterized protein.
      
 0.517
LOC101174726
Protein phosphatase, Mg2+/Mn2+ dependent, 1K.
      
 0.514
LOC100125495
Beta-carotene oxygenase 1.
   
  
 0.511
sult6b1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
 
 
0.505
pkd1l2
Polycystic kidney disease 1 like 2a.
      
 0.502
LOC101171857
Component of inhibitor of nuclear factor kappa B kinase complex.
      
 0.450
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
      
 0.450
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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