LOC101174467 protein (Oryzias latipes) - STRING interaction network

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[Homology]

Score

LOC101174467

PAT1 homolog 2. (707 aa)

Predicted Functional Partners:

lsm2

0.946

lsm7

0.945

lsm4

0.943

lsm5

0.933

lsm3

0.932

dcp1a

0.930

edc4

0.927

ENSORLP00000040491

0.924

lsm1

0.924

lsm6

0.920

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000040491	LOC101174467	ENSORLP00000040491	ENSORLP00000007262	Uncharacterized protein.	PAT1 homolog 2.	0.924
ENSORLP00000040491	dcp1a	ENSORLP00000040491	ENSORLP00000004243	Uncharacterized protein.	Decapping mRNA 1A.	0.791
ENSORLP00000040491	edc4	ENSORLP00000040491	ENSORLP00000016008	Uncharacterized protein.	Enhancer of mRNA decapping 4.	0.740
ENSORLP00000040491	lsm2	ENSORLP00000040491	ENSORLP00000041242	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.990
ENSORLP00000040491	lsm3	ENSORLP00000040491	ENSORLP00000042855	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.990
ENSORLP00000040491	lsm4	ENSORLP00000040491	ENSORLP00000010535	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.990
ENSORLP00000040491	lsm5	ENSORLP00000040491	ENSORLP00000031894	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.989
ENSORLP00000040491	lsm6	ENSORLP00000040491	ENSORLP00000038911	Uncharacterized protein.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.987
ENSORLP00000040491	lsm7	ENSORLP00000040491	ENSORLP00000043390	Uncharacterized protein.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.986
LOC101174467	ENSORLP00000040491	ENSORLP00000007262	ENSORLP00000040491	PAT1 homolog 2.	Uncharacterized protein.	0.924
LOC101174467	dcp1a	ENSORLP00000007262	ENSORLP00000004243	PAT1 homolog 2.	Decapping mRNA 1A.	0.930
LOC101174467	edc4	ENSORLP00000007262	ENSORLP00000016008	PAT1 homolog 2.	Enhancer of mRNA decapping 4.	0.927
LOC101174467	lsm1	ENSORLP00000007262	ENSORLP00000045782	PAT1 homolog 2.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.924
LOC101174467	lsm2	ENSORLP00000007262	ENSORLP00000041242	PAT1 homolog 2.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.946
LOC101174467	lsm3	ENSORLP00000007262	ENSORLP00000042855	PAT1 homolog 2.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.932
LOC101174467	lsm4	ENSORLP00000007262	ENSORLP00000010535	PAT1 homolog 2.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.943
LOC101174467	lsm5	ENSORLP00000007262	ENSORLP00000031894	PAT1 homolog 2.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.933
LOC101174467	lsm6	ENSORLP00000007262	ENSORLP00000038911	PAT1 homolog 2.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.920
LOC101174467	lsm7	ENSORLP00000007262	ENSORLP00000043390	PAT1 homolog 2.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.945
dcp1a	ENSORLP00000040491	ENSORLP00000004243	ENSORLP00000040491	Decapping mRNA 1A.	Uncharacterized protein.	0.791