Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
slc17a6Solute carrier family 17 member 6. (581 aa)    
Predicted Functional Partners:
slc6a5
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.641
syt1
Synaptotagmin Ia.
   
 
 0.629
gad2
Glutamate decarboxylase 2.
   
 
 0.620
LOC101156558
Coiled-coil domain containing 85A, like.
      
 0.610
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.605
ENSORLP00000026521
Uncharacterized protein.
     
 0.598
ENSORLP00000034554
C2 domain-containing protein.
     
 0.598
LOC101156534
Synaptotagmin Vb.
   
 
 0.554
LOC101157206
Uncharacterized protein.
   
 
 0.554
LOC101161806
Synaptotagmin IIa.
   
 
 0.554
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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