Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LACTB2Lactamase beta 2. (287 aa)    
Predicted Functional Partners:
ybey
YbeY metalloendoribonuclease.
  
 
 0.907
PLA2G12B
Phospholipase A2 group XIIB.
      
 0.758
slc16a9
Solute carrier family 16 member 9a.
      
 0.715
noa1
Nitric oxide associated 1.
   
  
 0.637
rps23
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
      
 0.626
c19h8orf33
Zgc:112185.
      
 0.620
rnaseh1
Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
     
 0.617
mcee
Methylmalonyl CoA epimerase.
  
 0.599
GLO1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
  
 0.589
LOC101166987
Potassium inwardly-rectifying channel, subfamily J, member 9.
      
 0.563
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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