STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bf/c2Bf/C2 protein; Belongs to the peptidase S1 family. (754 aa)    
Predicted Functional Partners:
c5
Uncharacterized protein.
   
 0.814
LOC101170893
Complement component c3b, tandem duplicate 2.
   
 0.766
LOC101169766
Serpin peptidase inhibitor, clade G (C1 inhibitor), member 1; Belongs to the serpin family.
   
 0.723
cfi
Complement factor I; Belongs to the peptidase S1 family.
   
 
 0.722
cfp
Uncharacterized protein.
   
 0.710
c3-2
Uncharacterized protein.
   
 0.699
c4b
Uncharacterized protein.
   
 0.657
H2M6Q1_ORYLA
NTR domain-containing protein.
   
 0.657
LOC110016646
Complement 4B (Chido blood group).
   
 0.656
LOC105354097
Uncharacterized protein.
    
 0.615
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.