STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101156652Deoxyribonuclease; Belongs to the DNase I family. (296 aa)    
Predicted Functional Partners:
LOC101162152
Ras-related GTP binding A.
   
 0.510
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.486
ENSORLP00000026521
Uncharacterized protein.
   
 
 0.486
ENSORLP00000034554
C2 domain-containing protein.
   
 
 0.486
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.481
pla2g1b
Phospholipase A(2).
   
  
 0.453
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.437
LOC101171857
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.437
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.437
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.437
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.