STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167529RAP1A, member of RAS oncogene family b. (185 aa)    
Predicted Functional Partners:
braf
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.982
afdn
Afadin, adherens junction formation factor a.
    
 0.975
rapgef1
Uncharacterized protein.
    
 0.973
krit1
KRIT1 ankyrin repeat containing.
    
 0.973
LOC101158464
Rap guanine nucleotide exchange factor (GEF) 1b.
    
 0.973
rapgef6
Rap guanine nucleotide exchange factor (GEF) 6.
    
 0.947
LOC101168734
Ras interacting protein 1.
    
 0.944
LOC101160907
Si:ch73-281f12.4.
    
 0.937
LOC101157201
Si:ch211-176g6.2.
    
 0.937
radil
Ras association and DIL domains.
    
 0.937
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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