STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfpUncharacterized protein. (573 aa)    
Predicted Functional Partners:
c3-1
Uncharacterized protein.
   
 0.948
H2LN81_ORYLA
Uncharacterized protein.
 
  
  0.795
H2LYU8_ORYLA
Uncharacterized protein.
 
  
  0.761
ENSORLP00000027319
Uncharacterized protein.
 
  
  0.726
bf/c2
Bf/C2 protein; Belongs to the peptidase S1 family.
   
 0.709
ENSORLP00000036617
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.709
LOC101167637
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.691
tsr3
Probable ribosome biogenesis protein tsr3; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.609
LOC101154774
Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.
 
 
  0.605
ENSORLP00000026828
Uncharacterized protein.
 
  
  0.599
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.