STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dymDymeclin. (669 aa)    
Predicted Functional Partners:
Unc79
Uncharacterized protein.
      
 0.690
vps50
VPS50 EARP/GARPII complex subunit.
   
  
 0.580
hhip
Hedgehog interacting protein.
      
 0.560
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
      
 0.559
LOC101164846
Zgc:92429.
      
 0.558
btbd7
BTB (POZ) domain containing 7.
      
 0.558
ctif
CBP80/20-dependent translation initiation factor.
      
 0.558
akap6
A kinase (PRKA) anchor protein 6.
      
 0.489
wdr48
WD repeat domain 48b.
      
 0.442
ppp6r2
Protein phosphatase 6, regulatory subunit 2a.
   
  
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.