Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dymDymeclin. (669 aa)    
Predicted Functional Partners:
hhip
Hedgehog interacting protein.
      
 0.766
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
      
 0.766
Unc79
Uncharacterized protein.
      
 0.711
ctif
CBP80/20-dependent translation initiation factor.
      
 0.694
wdr48
WD repeat domain 48b.
      
 0.692
oit3
Oncoprotein induced transcript 3.
      
 0.641
LOC101158035
RAB33A, member RAS oncogene family.
      
 0.611
vps50
VPS50 EARP/GARPII complex subunit.
      
 0.603
LOC101164846
Zgc:92429.
      
 0.602
LOC101164618
CASP2 and RIPK1 domain containing adaptor with death domain.
      
 0.601
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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