Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
alg9Ferredoxin-fold anticodon binding domain containing 1. (667 aa)    
Predicted Functional Partners:
lrrc47
Leucine rich repeat containing 47.
  
 0.932
farsb
Phenylalanyl-tRNA synthetase subunit beta; Belongs to the EF-1-beta/EF-1-delta family.
  
 0.932
yars1
Tyrosine--tRNA ligase.
  
  
 0.842
eprs1
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.841
thumpd1
THUMP domain containing 1.
   
   0.784
rsl24d1
Ribosomal L24 domain containing 1.
   
   0.774
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.763
apmap
Adipocyte plasma membrane associated protein.
  
  
 0.754
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
  
  
 0.754
LOC101166676
Zgc:194209.
  
  
 0.754
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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