STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155464Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (409 aa)    
Predicted Functional Partners:
vip
Vasoactive intestinal peptide.
    
 0.828
ADCYAP1
Adenylate cyclase activating polypeptide 1a.
    
 0.823
LOC101165591
Adenylate cyclase activating polypeptide 1b.
    
 0.823
ghrh
Growth hormone releasing hormone.
    
 0.609
LOC101155470
Uncharacterized protein.
    
 0.572
LOC101156047
Uncharacterized protein.
    
 0.562
ramp1
Receptor activity modifying protein 1.
    
 0.556
LOC101165131
Uncharacterized protein.
    
 0.556
LOC101166988
CRF domain-containing protein.
    
 0.545
crh
Corticotropin-releasing hormone.
    
 0.545
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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