STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158264Phospholipase A and acyltransferase 1. (175 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
    
 0.882
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
  
 0.801
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 0.787
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.784
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
 0.779
bag3
BCL2 associated athanogene 3.
   
 0.732
trap1
TNF receptor-associated protein 1.
   
 0.685
LOC101169506
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.685
tsc1
TSC complex subunit 1b.
   
 0.685
ENSORLP00000031311
Uncharacterized protein.
   
 0.685
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.