STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101169800Crystallin, alpha B, a; Belongs to the small heat shock protein (HSP20) family. (161 aa)    
Predicted Functional Partners:
cryaa
Alpha-crystallin A chain; May contribute to the transparency and refractive index of the lens; Belongs to the small heat shock protein (HSP20) family.
    
0.988
hspb6
Heat shock protein, alpha-crystallin-related, b6; Belongs to the small heat shock protein (HSP20) family.
  
0.968
LOC101171851
Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family.
   
 
 0.712
LOC101166967
Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.
   
 
 0.695
LOC101166150
Heat shock protein, alpha-crystallin-related, b15; Belongs to the small heat shock protein (HSP20) family.
   
0.678
bag3
BCL2 associated athanogene 3.
   
 
 0.668
hspb8
Heat shock protein b8; Belongs to the small heat shock protein (HSP20) family.
   
0.626
hsf4
Heat shock transcription factor 4.
    
 0.609
hsf2
Heat shock transcription factor 2.
    
 0.609
HSF1
Heat shock transcription factor 1.
    
 0.609
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.