Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101156469 | LOC101158703 | ENSORLP00000012582 | ENSORLP00000007429 | Uncharacterized protein. | Uncharacterized protein. | 0.967 |
LOC101156469 | LOC101159835 | ENSORLP00000012582 | ENSORLP00000015339 | Uncharacterized protein. | RAB5A, member RAS oncogene family, a. | 0.451 |
LOC101156469 | rab5c | ENSORLP00000012582 | ENSORLP00000004847 | Uncharacterized protein. | RAB5C, member RAS oncogene family. | 0.451 |
LOC101156469 | rabep1 | ENSORLP00000012582 | ENSORLP00000018966 | Uncharacterized protein. | Rabaptin, RAB GTPase binding effector protein 1. | 0.850 |
LOC101156469 | rabep2 | ENSORLP00000012582 | ENSORLP00000015055 | Uncharacterized protein. | Rabaptin, RAB GTPase binding effector protein 2. | 0.735 |
LOC101158129 | LOC101158703 | ENSORLP00000016222 | ENSORLP00000007429 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Uncharacterized protein. | 0.962 |
LOC101158129 | LOC101159835 | ENSORLP00000016222 | ENSORLP00000015339 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | RAB5A, member RAS oncogene family, a. | 0.739 |
LOC101158129 | rab5c | ENSORLP00000016222 | ENSORLP00000004847 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | RAB5C, member RAS oncogene family. | 0.739 |
LOC101158703 | LOC101156469 | ENSORLP00000007429 | ENSORLP00000012582 | Uncharacterized protein. | Uncharacterized protein. | 0.967 |
LOC101158703 | LOC101158129 | ENSORLP00000007429 | ENSORLP00000016222 | Uncharacterized protein. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.962 |
LOC101158703 | LOC101158748 | ENSORLP00000007429 | ENSORLP00000036018 | Uncharacterized protein. | Golgi associated, gamma adaptin ear containing, ARF binding protein 1. | 0.967 |
LOC101158703 | LOC101159835 | ENSORLP00000007429 | ENSORLP00000015339 | Uncharacterized protein. | RAB5A, member RAS oncogene family, a. | 0.957 |
LOC101158703 | LOC101160203 | ENSORLP00000007429 | ENSORLP00000026315 | Uncharacterized protein. | VPS9 domain-containing protein. | 0.969 |
LOC101158703 | LOC101171835 | ENSORLP00000007429 | ENSORLP00000018253 | Uncharacterized protein. | Uncharacterized protein. | 0.967 |
LOC101158703 | als2 | ENSORLP00000007429 | ENSORLP00000000031 | Uncharacterized protein. | Alsin Rho guanine nucleotide exchange factor ALS2 b. | 0.969 |
LOC101158703 | rab5c | ENSORLP00000007429 | ENSORLP00000004847 | Uncharacterized protein. | RAB5C, member RAS oncogene family. | 0.957 |
LOC101158703 | rabep1 | ENSORLP00000007429 | ENSORLP00000018966 | Uncharacterized protein. | Rabaptin, RAB GTPase binding effector protein 1. | 0.999 |
LOC101158703 | rabep2 | ENSORLP00000007429 | ENSORLP00000015055 | Uncharacterized protein. | Rabaptin, RAB GTPase binding effector protein 2. | 0.999 |
LOC101158748 | LOC101158703 | ENSORLP00000036018 | ENSORLP00000007429 | Golgi associated, gamma adaptin ear containing, ARF binding protein 1. | Uncharacterized protein. | 0.967 |
LOC101158748 | LOC101159835 | ENSORLP00000036018 | ENSORLP00000015339 | Golgi associated, gamma adaptin ear containing, ARF binding protein 1. | RAB5A, member RAS oncogene family, a. | 0.451 |
page 1 of 4