STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dnajc21DnaJ heat shock protein family (Hsp40) member C21. (539 aa)    
Predicted Functional Partners:
nmd3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.886
LOC101170587
Proliferation-associated 2G4, b.
   
 
 0.831
pa2g4
Proliferation-associated 2G4, a.
   
 
 0.831
dnajc24
Uncharacterized protein.
   
  
 0.824
znf622
Zinc finger protein 622.
   
 
 0.808
Retreg1
Reticulophagy regulator 1.
   
 
 0.805
dnajc2
DnaJ (Hsp40) homolog, subfamily C, member 2.
   
 
0.785
mrps18b
Mitochondrial ribosomal protein S18B.
    
   0.764
retreg2
Reticulophagy regulator family member 2.
   
 
 0.737
retreg3
Reticulophagy regulator family member 3.
   
 
 0.737
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.