STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101169766Serpin peptidase inhibitor, clade G (C1 inhibitor), member 1; Belongs to the serpin family. (594 aa)    
Predicted Functional Partners:
H2MAB2_ORYLA
Complement component 1, r subcomponent; Belongs to the peptidase S1 family.
   
 0.925
H2MAD0_ORYLA
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.768
HGFAC
HGF activator.
    
 0.753
LOC101157838
C1q domain-containing protein.
   
 0.751
bf/c2
Bf/C2 protein; Belongs to the peptidase S1 family.
   
 0.739
LOC101161146
C1q domain-containing protein.
   
 
 0.709
c1qbp
Complement component 1, q subcomponent binding protein.
   
 0.689
ABCC4
ATP binding cassette subfamily C member 4.
   
  
 0.683
cyp1a
Cytochrome P450 1A1; Cytochromes P450 are a group of heme-thiolate monooxygenases. They oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.
   
  
 0.677
LOC101170246
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
   
 0.568
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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