STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101169766Serpin peptidase inhibitor, clade G (C1 inhibitor), member 1; Belongs to the serpin family. (594 aa)    
Predicted Functional Partners:
H2MAB2_ORYLA
Complement component 1, r subcomponent; Belongs to the peptidase S1 family.
   
 0.954
HGFAC
HGF activator.
   
 0.942
cygb1
Cytoglobin-1; May have a protective function during conditions of oxidative stress. May be involved in intracellular oxygen storage or transfer. Belongs to the globin family.
   
 
  0.917
cygb
Cytoglobin-2; May have a protective function during conditions of oxidative stress. May be involved in intracellular oxygen storage or transfer. Belongs to the globin family.
   
 
  0.917
H2MAD0_ORYLA
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.898
LOC101157838
C1q domain-containing protein.
   
 0.771
LOC101166711
Ig-like domain-containing protein.
     
 0.762
agt
Angiotensinogen; Belongs to the serpin family.
  
    0.723
bf/c2
Bf/C2 protein; Belongs to the peptidase S1 family.
   
 0.723
c1qbp
Complement component 1, q subcomponent binding protein.
    
 0.703
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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