Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wdr66WD repeat domain 66. (983 aa)    
Predicted Functional Partners:
cfap43
Cilia and flagella associated protein 43.
   
 
 0.944
WDR63
WD repeat domain 63.
   
 
 0.894
cfap44
WD_REPEATS_REGION domain-containing protein.
   
 0.884
maats1
MYCBP-associated, testis expressed 1.
   
 
 0.854
cfap52
Cilia and flagella associated protein 52.
   
 0.830
cfap58
Cilia and flagella associated protein 58.
   
 0.826
Dnali1
Dynein, axonemal, light intermediate chain 1.
   
 
 0.815
CFAP61
Cilia and flagella associated protein 61.
    
 0.808
tekt2
Tektin 2 (testicular).
   
 
 0.804
iqub
IQ motif and ubiquitin domain containing.
   
   0.800
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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