STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr66WD repeat domain 66. (983 aa)    
Predicted Functional Partners:
cfap43
Cilia and flagella associated protein 43.
      
 0.558
maats1
MYCBP-associated, testis expressed 1.
      
 0.485
arhgef3
Rho guanine nucleotide exchange factor (GEF) 3.
      
 0.482
ENSORLP00000032656
Uncharacterized protein.
   
 0.472
pik3cg
Phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma; Belongs to the PI3/PI4-kinase family.
   
 0.467
cfap52
Cilia and flagella associated protein 52.
   
 0.456
entpd6
Ectonucleoside triphosphate diphosphohydrolase 6; Belongs to the GDA1/CD39 NTPase family.
    
 
 0.447
park7
DJ-1.
    
 
 0.415
cfap58
Cilia and flagella associated protein 58.
    
 0.411
CFAP61
Cilia and flagella associated protein 61.
    
 
 0.409
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.