Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SUCNR1Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family. (316 aa)    
Predicted Functional Partners:
LOC101163022
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
    
 
 0.660
mettl21c
Zgc:92518.
      
 0.654
LOC101157715
Bone morphogenetic protein 10, like.
     
 0.622
H2LQ54_ORYLA
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
    
 
 0.620
bmp10
Bone morphogenetic protein 10.
     
 0.509
LOC101163237
Growth differentiation factor 2.
     
 0.508
appbp2
Amyloid beta precursor protein (cytoplasmic tail) binding protein 2.
     
 0.501
rhbg
Ammonium transporter Rh type B; Functions as an ammonia transporter. May play a role in the elimination of ammonia in the gill (By similarity); Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
      
 0.492
LOC101165880
BTB domain-containing protein; Belongs to the potassium channel family.
      
 0.486
LOC101165388
Solute carrier family 12 member 5a.
    
 
 0.468
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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