STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167231Gastrin domain-containing protein. (198 aa)    
Predicted Functional Partners:
CCKAR
Cholecystokinin A receptor; Belongs to the G-protein coupled receptor 1 family.
   
 0.982
LOC101161683
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
   
 0.982
LOC101175467
Si:dkey-1h24.2; Belongs to the G-protein coupled receptor 1 family.
   
 0.982
CCK
Cholecystokinin.
  
  
 
0.907
LOC105354756
Gastrin domain-containing protein.
     
  0.900
LOC101157195
Neurotensin.
     
 0.667
LOC101173159
Motilin receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.617
ENSORLP00000032656
Uncharacterized protein.
   
 
 0.605
tac1
Uncharacterized protein.
     
 0.599
Agtr1
Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.
    
 0.578
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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