STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hspa4Heat shock protein 4b. (847 aa)    
Predicted Functional Partners:
stip1
Stress-induced phosphoprotein 1.
  
 0.935
gak
Cyclin G associated kinase.
    
 0.931
stub1
STIP1 homology and U-Box containing protein 1.
    
 
 0.922
LOC101160233
Tight junction protein 1b; Belongs to the MAGUK family.
    
 0.916
LOC101166369
Tight junction protein 1a; Belongs to the MAGUK family.
    
 0.916
LOC101166977
Heat shock protein 4a.
  
  
0.902
bag3
BCL2 associated athanogene 3.
   
 0.902
LOC101169506
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.886
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
  
0.885
hspa5
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
0.853
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.