Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2LNA1_ORYLAUncharacterized protein. (439 aa)    
Predicted Functional Partners:
Muc5ac
VWFD domain-containing protein.
 
0.919
ENSORLP00000035826
VWFD domain-containing protein.
 
    
0.906
H2LNI0_ORYLA
Uncharacterized protein.
 
     
0.885
Muc2
Uncharacterized protein.
 
    
0.766
MSL3
MSL complex subunit 3.
    
 0.727
ENSORLP00000043175
Uncharacterized protein.
 
      0.686
LOC101156373
MSL complex subunit 2.
    
 0.625
MSL2
MSL complex subunit 2.
    
 0.625
maml1
Mastermind-like transcriptional coactivator 1.
   
 0.601
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
   
 0.581
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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