Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pompProteasome maturation protein. (141 aa)    
Predicted Functional Partners:
psmb1
Proteasome subunit beta.
   
 0.999
psmb4
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.998
psmb2
Proteasome subunit beta.
   
 0.998
psma3
Proteasome subunit alpha type.
   
 0.998
psma1
Proteasome endopeptidase complex.
   
 0.997
psma4
Proteasome subunit alpha type.
   
 0.997
psma2
Proteasome subunit alpha type.
   
 0.997
psmb3
Proteasome subunit beta 3.
   
 0.996
psmg2
Proteasome assembly chaperone 2; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1. Belongs to the PSMG2 family.
   
 0.995
psma5
Proteasome subunit alpha type.
   
 0.993
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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