close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170789Uncharacterized protein. (699 aa)    
Predicted Functional Partners:
LOC101164215
Uncharacterized protein.
   
0.937
l1cam
L1 cell adhesion molecule, paralog a.
   
0.937
ncam2
Zgc:152904.
     
 
0.900
LOC101173164
Neural cell adhesion molecule 1a.
     
 
0.900
ncam1
Neural cell adhesion molecule 1b.
     
 
0.900
LOC101170837
Uncharacterized protein.
    
 0.812
LOC101159060
Leucine rich repeat containing 17.
   
 0.709
LOC101171989
Leucine rich repeat containing 17.
    
 0.688
st8sia2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
   
 
 0.614
LOC101160640
Neuroplastin b.
    
0.614
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.