STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170789Uncharacterized protein. (699 aa)    
Predicted Functional Partners:
LOC101164215
Uncharacterized protein.
   
0.939
l1cam
L1 cell adhesion molecule, paralog a.
   
0.939
ncam2
Zgc:152904.
     
 
0.900
LOC101173164
Neural cell adhesion molecule 1a.
     
 
0.900
ncam1
Neural cell adhesion molecule 1b.
     
 
0.900
LOC101170837
Uncharacterized protein.
    
 0.696
st8sia2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
   
 
 0.683
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
      
 0.657
cntn2
Contactin 2.
   
 0.621
LOC101159060
Leucine rich repeat containing 17.
    
 0.619
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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