Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167301Nedd4 family interacting protein 1. (219 aa)    
Predicted Functional Partners:
nedd4l
NEDD4 like E3 ubiquitin protein ligase.
    
 
 0.753
Nedd4
Uncharacterized protein.
    
 
 0.753
ENSORLP00000041845
HECT domain-containing protein.
    
 
 0.753
LOC101174746
E3 ubiquitin-protein ligase.
    
 
 0.739
LOC101167949
E3 ubiquitin-protein ligase.
    
 
 0.739
bri3
Brain protein I3.
    
   0.702
LOC101172833
Tumor necrosis factor receptor superfamily, member a.
    
   0.701
wwp1
WW domain containing E3 ubiquitin protein ligase 1.
    
 
 0.666
wwp2
E3 ubiquitin-protein ligase.
    
 
 0.666
LOC101175073
Solute carrier family 11 member 2.
   
 
 0.609
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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