STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167301Nedd4 family interacting protein 1. (219 aa)    
Predicted Functional Partners:
trip12
Thyroid hormone receptor interactor 12.
      
 0.589
LOC101175073
Solute carrier family 11 member 2.
   
 
 0.493
LOC101155197
Uncharacterized protein.
   
 
 0.493
wwp1
WW domain containing E3 ubiquitin protein ligase 1.
    
 
 0.469
nedd4l
NEDD4 like E3 ubiquitin protein ligase.
    
 
 0.469
wwp2
E3 ubiquitin-protein ligase.
    
 
 0.469
Nedd4
Uncharacterized protein.
    
 
 0.469
ENSORLP00000041845
HECT domain-containing protein.
    
 
 0.469
ndufa6
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed to be not involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
      
 0.468
LOC101174746
E3 ubiquitin-protein ligase.
    
 
 0.415
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.