Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H2LNC9_ORYLAArginine/serine-rich coiled-coil 2. (354 aa)    
Predicted Functional Partners:
slc25a32
Solute carrier family 25 member 32b; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.814
znf277
Zinc finger protein 277.
    
 
 0.803
H2M255_ORYLA
RNA binding motif protein 25a.
   
  
 0.779
LOC101165683
RNA binding motif protein 25b.
   
  
 0.779
ENSORLP00000045060
RRM domain-containing protein.
   
  
 0.779
pdss2
Prenyl (decaprenyl) diphosphate synthase, subunit 2; Belongs to the FPP/GGPP synthase family.
    
   0.731
fam172a
Family with sequence similarity 172 member A.
      
 0.692
LOC101155103
Uncharacterized protein.
   
   0.684
LOC101167788
RNA binding motif protein 39b.
   
   0.684
zranb2
Zinc finger, RAN-binding domain containing 2.
   
  
 0.638
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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