Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
znf532Zinc finger protein 532. (1290 aa)    
Predicted Functional Partners:
LOC101161311
Protein kinase C binding protein 1, like.
   
 
 0.841
ints3
Integrator complex subunit 3.
   
   0.717
ints1
DUF3677 domain-containing protein.
   
   0.717
ints5
Integrator complex subunit 5.
   
   0.716
LOC101169699
Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.694
znf592
Zinc finger protein 592.
   
 
 0.686
UBE2O
Ubiquitin conjugating enzyme E2 O.
   
  0.647
zzz3
Zinc finger, ZZ-type containing 3.
   
 
 0.565
ZBTB21
Zinc finger and BTB domain containing 21.
   
  
 0.544
nsd3
Nuclear receptor binding SET domain protein 3.
   
 0.503
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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