Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163670Calcium channel, voltage-dependent, gamma subunit 6a. (286 aa)    
Predicted Functional Partners:
LOC101156213
Calcium channel, voltage-dependent, alpha 2/delta subunit 1a.
   
 
  0.923
cacna2d1
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
   
 
  0.923
cacng1
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
   
 
 
0.902
LOC101167711
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
   
 
 
0.902
LOC101165420
Calcium channel, voltage-dependent, gamma subunit 6b.
  
  
 
0.901
LOC101168431
Protein kinase domain-containing protein.
     
 0.668
camk2a
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
     
 0.668
LOC101172229
Calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1; Belongs to the protein kinase superfamily.
     
 0.668
cacnb1
Calcium channel, voltage-dependent, beta 1 subunit.
   
 
  0.652
cacnb4.1
Voltage-gated calcium channel beta 4.1 subunit transcript variant 1.
   
 
  0.652
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.